Research Publications

Authors:

         Frank W.R. Chaplen

         John S. Selker

Frank W. R. Chaplen

Burrows, E.H., Wong, W.K., Fern, X., Chaplen, F.W.R. and Ely, R.L.  (2009) Optimization of pH and Nitrogen for Enhanced Hydrogen Production by Synechocystis sp. PCC 6803 via Statistical and Machine Learning Methods. Accepted. Biotech. Prog. Burrows, E.H., Chaplen, F.W.R. and Ely, R.L.  (2008) Optimization of photofermentative hydrogen production by Synechocystis sp. PCC 6803. In Press. Int. J. Hydrogen Energy Orhanovic, I., Crinon, R.J., Chaplen, F.W.R., Weisshaar, A. (2007) Signal transduction pathway modeling using sequences of chromatophore images. IEEE Trans Nanobioscience 6(3):210-218. Chaplen, F.W.R., Vissvesvaran, G., Henry, E.C. and Jovanovic, G.N. (2007) Improvement of bioactive compound classification through integration of orthogonal cell-based biosensing methods. Sensors, 7:38-51. Chaplen, F.W.R., Upson, R., McFadden, P.N., Kolodjiez, W.J. (2002) Fish Chromatophores as Cytosensors in a Microscale Device: Detection of Environmental Toxins and Microbial Pathogens. Pigment Cell Res. 15:19-26. (US 7,132,242) Method and device for targeted delivery of materials to selected single cells (2006) McLelland, Paul H., Dunfield, J.S., Upson, R.H. and Chaplen, F.W.R (Inventors). (US 6,913,877) Methods for detecting bioactive compounds (2005) Chaplen, F.W.R. et al. (Inventors)   MacDonald, M.J., F. W. R. Chaplen, C. K. Triplett, Q. Gong, H. Drought. (2006) Stimulation of insulin release by glyceraldehyde may not be similar to glucose. Arch Biochem Biophys, 447(2):118-26. Kingkeohoi, S. and F.W.R. Chaplen, (2005) Analysis of methylglyoxal metabolism in CHO cells grown in culture. Cytotechnology, 48:1-13. Sharma, V., A. Narayanan, T. Rengachari, G.C. Temes, F.W.R. Chaplen, and U. Moon. (2005) A low-cost, portable generic biotoxicity assay for environmental monitoring applications.  Biosensors and Bioelectronics. 20(11):2218-27. Clark, K.J, Chaplen, F.W. and Harcum, S.W. (2004) Temperature effects on product quality related enzymes in batch CHO cell cultures producing recombinant tPA. Biotechnol. Prog. 20(6):1888-92. Van Herreweghe, F., J. Mao, F.W.R. Chaplen, J. Grooten, K. Gevaert, J. Vandekerckhove, and K. Vancompernolle. (2002) Tumor Necrosis Factor-induced modulation of glyoxalase I activities through phosphorylation by PKA results in cell death and is accompanied by the formation of specific methylglyoxal-derived AGEs. Proc. Natl. Acad. Sci. USA, 99(2):949-54

 

John S. Selker

• Selker, J., and T. P. A. Ferre (2009), The Ah Ha Moment of Measurement: Introduction to the Special Section on Hydrologic Measurement Methods, Water Resour. Res., 45, W00D00, doi:10.1029/2009WR007966

• Nadeau D.F., W. Brutsaert, M. B. Parlange, E. Bou-Zeid, G. Barrenetxea, O. Couach, M.-O. Boldi, John Selker, M. Vetterli. Estimation of Urban Sensible Heat Flux Using a Dense Wireless Network of Observations. Environ. Fluid Mech. 2009. In press. Accepted 5 May 2009.

• Kumar, P., T. H. Illangasekare, G. C. Sander, J. S. Selker, and T. Torgersen. Editorial: Building on the Legacy of Water Resources Research. Water Resour. Res., doi:10.1029/2009WR008174. In press. Accepted 4 May 2009.

• Rupp, D. E., R. F. Keim, M. Ossiander, M. Brugnach, and J. S. Selker. Timescale and Intensity Dependency in Multiplicative Cascades for Temporal Rainfall Disaggregation. Water Resour. Res., doi:10.1029/2008WR007321. In press. Accepted 1 May 2009.

• Selker, J. S., and T. P.A. Ferre. The Ah Ha Moment of Measurement: An Introduction to the Special Section on Measurement Methods.Water Resour. Res. doi:10.1029/2009WR007966. In press. Accepted 16 April 2009.

• Selker, J.S., J.D. Suter, R.H. Cuenca, B.A. Flugstad, and S.F. Kelly. Tension Infiltrometer Enhancements with Automated Pneumatic Control and More Durable Base Plate. Water Resour. Res doi:10.1029/2008WR007075. In press. 2009.

• Tyler, S. W., J. S. Selker, M. B. Hausner, C. E. Hatch, T. Torgersen, C. E. Thodal, and G. Schladow. Environmental Temperature Sensing using Raman Spectra DTS Fiber-Optic Methods. Wat. Resour. Res., doi:10.1029/2008WR007052. 2009.

• Friesen, J., C. van Beek, J. Selker, H. H. G. Savenije, and N. van de Giesen (2008), Tree Rainfall Interception Measured by Stem Compression, Water Resour. Res., 44, W00D15, doi:10.1029/2008WR007074.

• Tyler, S.W., S.A. Burak, J.P. McNamara, A. Lamontagne, J.S. Selker, J. Dozier. Spatially Distributed Temperatures at the Base of Two Mountain Snowpacks Measured with Fiber-Optic Sensors. J. of Glaciology, 54(187). 2008
  
• Vercauteren N., E. Bou-Zeid, M.B. Parlange, U. Lemmin, H. Huwald, J.S. Selker, C. Meneveau. Subgrid-Scale Dynamics of Water Vapor, Heat, and Momentum Over a Lake. Boundary Layer Meteorology 2008. 128:205-228

• Tyler, S.W., S.A. Burak, J.P. McNamara, A. Lamontagne, J.S. Selker, J. Dozier.  Spatially Distributed Temperatures at the Base of Two Mountain Snowpacks Measured with Fiber-Optic Sensors. J. of Glaciology, 54(187). 2008

• Burns, E.R., M.I. Dragila, J.S. Selker, R.B. Guenther, J.-Y. Parlange and N. Weisbrod. Correction of the Buckingham–Darcy Law for flow of high strength salts in variably saturated porous media. Ad. Wat Resour.  30(3):469-482. 2007.

• Selker, J.S., N. van de Giesen, M. Westhoff, W. Luxemburg, and

        M. Parlange.  Fiber Optics Opens Window on Stream Dynamics. Geophysical Research    

        Letters  DOI:10.1029/2006GLO27979, 2006

    

• Selker, J.S., L. Thévenaz, H. Huwald, A. Mallet, W. Luxemburg, N. van de Giesen, M. Stejskal, J. Zeman, and M. Westhoff, and M.B. Parlange.Distributed Fiber Optic Temperature Sensing for Hydrologic Systems.  Accepted pending revisions.  Wat. Resourc. Research.42, W12202, doi:10.1029/2006WR005326. 2006

• Assouline, S., J.S. Selker and J.Y. Parlange. A simple accurate method to predict time of ponding under variable intensity rainfall. Wat. Resourc. Research 43, W03426 doi:10.1029/2006WR005138. 2006.

• Selker, J.S., M.R. Niemet, N.G. McDuffie, S.M. Gorelick and J.Y. Parlange.

  The Local Geometry of Gas Injection into Saturated Homogeneous Porous Media. Transport in Porous Media. DOI 10.1007/s11242-006-0005-0. 2006. 

• Yarwood, R.R., M.L. Rockhold, M.R. Niemet, J.S. Selker, and P.J. Bottomley. Impact of Microbial Growth on Water Flow and Solute Transport in Unsaturated Porous Media.  Wat. Resourc. Research 42, W10405, doi:10.1029/2005WR004550. 2006.

• Parker, L., R. Yarwood, and J.S. Selker. Observations of Gas Flow in Porous Media using a Light Transmission Technique. Water Resour. Res., 42, W05501, doi:10.1029/2005WR004080. 2006.

• Burns, E.R., J.Y. Parlange, J.S. Selker, and R.B. Guenther.  Thermodynamic Correction for Salts in Variably Saturated Porous Media. 63(3):381-398.  Transport in Porous Media. 2006.

• Rupp, D.E. and J.S. Selker.  Information, artifacts, and noise in dQ/dt – Q recession analysis. Adv. Wat. Resour. 29(2):154-160. 2006.

• Rupp, D.E., K. Warren, E. Peachy and J.S. Selker. Diuron in Surface Runoff and Tile Drainage from Two Grass-Seed Fields. J. Env. Qual. 35:303-311. 2006.

• Selker, J.S. and D. Rupp.  An environmentally driven time integrating water sampler.  Water Resources Research.  41, W09201, doi:10.1029/2005WR004040. 2005.

• Rupp, D.E. and J.S. Selker.  Drainage of a horizontal Boussinesq aquifer with a power-law hydraulic conductivity profile. Water Resources Research. 41. doi:10.1029/2005WR004241. 2005.

• Li, L., D.A. Lockington, M.B. Parlange, F. Stagnitti, D.-S. Jeng, J.S. Selker, A.S. Telyakovskiy, D.A. Barry, J.-Y. Parlange. Similarity solution of axisymmetric flow in porous media.  Adv. Wat. Resour. 28(10): 1076-1082. 2005.

• Rockhold, M. L., R.R. Yarwood, M.R. Niemet, P.J. Bottomley, and J.S. Selker. Experimental observations and numerical modeling of coupled microbial and transport processes in variably saturated sand. Vadose Zone J. 4:407-417. doi:10.2136/vzj2004.0087. 2005.

• Blume, T., N. Weisbrod, and J.S. Selker.  On the critical salt concentrations for particle detachment in homogeneous sand and heterogeneous Hanford sediments.  Geoderma, 124(1-2):121-132. 2005.